SporeWeb

Bacillus subtilis

User subset of genes

t1 50

 

add genes of interest (example: yybN,yxbD,spo0A,kinA,sigH)

found 10 genes with 26 edges in search 'yybN,yxbD,spo0A,kinA,sigH'
Graph

Click nodes or edges.

Recalculate layout

 

Regulatory network interactions covering all stages


 

 

 

 

 

Sporulation cycle of Bacillus subtilis

 

 

All genes have been colour-coded according to their functional category. Important germination genes that are part of the minimal sporulation set as determined by Galperin and coworkers 182 are indicated by thick black rims.

 

Class

  Antimicrobials
  Biofilm formation
  Cell division and DNA replication
  Cell wall degradation
  Cell wall metabolism
  Cell wall synthesis
  Competence
  DNA protection
  DNA repair
  Metabolism
  Mother cell lysis
  Mother cell metabolism
  Motility and chemotaxis
  Nucleotide biosynthesis
  Phosphorelay
  Resistance
  Respiration
  RNA chaperones
  Rnases
  Sortases
  Spore coat
  Spore coat assembly
  Spore coat maturation
  Spore cortex
  Spore germination
  Spore maturation
  Spore morphogenesis
  Sporulation protein
  Toxins and antitoxins
  Transcriptional regulation
  Translation
  Transport

 

Usersubset legenda

 

blue edge = expression

red edge  = repression

 

Veg = Vegetative state

Sta = Starvation state

Ons = Onset state

Eng = Engulfment state

Com = Commitment state

 

(use comma separated list for gene input)